FSH – Fast Spaced Seed Hashing

FSH

:: DESCRIPTION

FSH exploits the similarity of adjacent spaced seed hash values in an input sequence in order to efficiently compute the next hash.

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::DEVELOPER

Matteo Comin

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

FSH

:: MORE INFORMATION

Citation

J Comput Biol 2019 Dec 4
Iterative Spaced Seed Hashing: Closing the Gap Between Spaced Seed Hashing and k-mer Hashing
Enrico Petrucci , Laurent NoƩ , Cinzia Pizzi , Matteo Comin

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