EUPAN – Eukaryote Pan-genome ANalysis Toolkit

EUPAN

:: DESCRIPTION

EUPAN is a eukaryotic pan-genome analysis toolkit, enabling automatic large-scale eukaryotic pan-genome analyses and detection of gene PAVs at a relatively low sequencing depth.

Advertisement

::DEVELOPER

Dr. Chaochun Wei

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R
  • Perl
  • Python

:: DOWNLOAD

EUPAN

:: MORE INFORMATION

Citation:

Bioinformatics. 2017 Aug 1;33(15):2408-2409. doi: 10.1093/bioinformatics/btx170.
EUPAN enables pan-genome studies of a large number of eukaryotic genomes.
Hu Z, Sun C, Lu KC, Chu X, Zhao Y, Lu J, Shi J, Wei C

Leave a Reply

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.