dRep 3.2.2 – De-replication of Microbial Genomes

dRep 3.2.2

:: DESCRIPTION

dRep is a python program for rapidly comparing large numbers of genomes. dRep can also “de-replicate” a genome set by identifying groups of highly similar genomes and choosing the best representative genome for each genome set.

Advertisement

::DEVELOPER

Banfield Lab

:: SCREENSHOTS

N/a

:: REQUIREMENTS

  • Linux/windows /MacOsX
  • Python

:: DOWNLOAD

dRep

:: MORE INFORMATION

Citation

Olm MR, Brown CT, Brooks B, Banfield JF.
dRep: a tool for fast and accurate genomic comparisons that enables improved genome recovery from metagenomes through de-replication.
ISME J. 2017 Dec;11(12):2864-2868. doi: 10.1038/ismej.2017.126. Epub 2017 Jul 25. PMID: 28742071; PMCID: PMC5702732.

Leave a Reply

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.