Cosine 2.1

:: DESCRIPTION

COSINE (COndition SpecIfic sub-NEtwork) employs a scoring function that jointly measures the condition-specific changes of both “nodes” (individual genes) and “edges” (gene-gene co-expression). It uses the genetic algorithm to search for the single optimal sub-network which maximizes the scoring function.

::DEVELOPER

Zhao Hongyu’s Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Windows / Linux / MacOsX
• R Package

:: DOWNLOAD

 Cosine

:: MORE INFORMATION

Citation

Haisu Ma et al.
COSINE: COndition-SpecIfic sub-NEtwork identification using a global optimization method
Bioinformatics (2011)doi: 10.1093/bioinformatics/btr1