BreakTrans 0.0.6 – Uncover the Genomic Architecture of Gene Fusions

BreakTrans 0.0.6

:: DESCRIPTION

BreakTrans is a computer program that maps predicted gene fusions to genomic structural rearrangements so as to validate both types of events and provide them mechanism/functional interpretation.

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::DEVELOPER

Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

 BreakTrans

:: MORE INFORMATION

Citation

Genome Biol. 2013 Aug 23;14(8):R87.
BreakTrans: uncovering the genomic architecture of gene fusions.
Chen K1, Navin NE, Wang Y, Schmidt HK, Wallis JW, Niu B, Fan X, Zhao H, McLellan MD, Hoadley KA, Mardis ER, Ley TJ, Perou CM, Wilson RK, Ding L.