BayesPairing
:: DESCRIPTION
BayesPairing is an automated, efficient and customizable tool for (i) building Bayesian networks representing RNA 3D modules and (ii) rapid identification of 3D modules in sequences. BayesPairing uses a flexible definition of RNA 3D modules that allows us to consider complex architectures such as multi-branched loops and features multiple algorithmic improvements. BayesPairing can handle a broader range of motifs (versatility) and offers considerable running time improvements (efficiency), opening the door to a broad range of large-scale applications.
::DEVELOPER
Computer Science and Biology at McGill
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- Python
- C++ Compiler
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Nucleic Acids Res. 2019 Apr 23;47(7):3321-3332. doi: 10.1093/nar/gkz102.
Automated, customizable and efficient identification of 3D base pair modules with BayesPairing.
Sarrazin-Gendron R, Reinharz V, Oliver CG, Moitessier N, Waldispühl J.