Auto-PSS-Genome v1.5.0

:: DESCRIPTION

Auto-PSS-Genome is a Compi pipeline to automatically identify positively selected amino acid sites using three different methods, namely CodeML, omegaMap, and FUBAR in complete genomes (FASTA files containing all coding sequences).

::DEVELOPER

SING Group.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux

:: DOWNLOAD

Auto-PSS-Genome

:: MORE INFORMATION

Citation

López-Fernández H, Vieira CP, Ferreira P, Gouveia P, Fdez-Riverola F, Reboiro-Jato M, Vieira J.
On the Identification of Clinically Relevant Bacterial Amino Acid Changes at the Whole Genome Level Using Auto-PSS-Genome.
Interdiscip Sci. 2021 Jun;13(2):334-343. doi: 10.1007/s12539-021-00439-2. Epub 2021 May 19. PMID: 34009546.