ASGAL v1.1.6 – Alternative Splicing Graph ALigner

ASGAL v1.1.6

:: DESCRIPTION

ASGAL is a tool for detecting the alternative splicing events expressed in a RNA-Seq sample with respect to a gene annotation.

Advertisement

::DEVELOPER

AlgoLab

:: SCREENSHOTS

N/A

::REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

ASGAL

:: MORE INFORMATION

Citation

Denti L, Rizzi R, Beretta S, Vedova GD, Previtali M, Bonizzoni P.
ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events.
BMC Bioinformatics. 2018 Nov 20;19(1):444. doi: 10.1186/s12859-018-2436-3. PMID: 30458725; PMCID: PMC6247705.

Leave a Reply

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.