aroma.affymetrix 3.2.0
:: DESCRIPTION
Aroma.affymetrix is an R package for analyzing large Affymetrix data sets. It allows you to analyze 100-1,000s of arrays of various chip types, e.g. expression arrays, SNP chips, exon arrays and so on.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/MacOsX/Windows
- R package
:: DOWNLOAD
:: MORE INFORMATION
Citation
ACNE: a summarization method to estimate allele-specific copy numbers for Affymetrix SNP arrays.
Ortiz-Estevez M, Bengtsson H, Rubio A.
Bioinformatics. 2010 Aug 1;26(15):1827-33. doi: 10.1093/bioinformatics/btq300
Estimation and assessment of raw copy numbers at the single locus level.
Bengtsson H, Irizarry R, Carvalho B, Speed TP.
Bioinformatics. 2008 Mar 15;24(6):759-67. doi: 10.1093/bioinformatics/btn016.