AffyGCQC 1.02
:: DESCRIPTION
AffyGCQC is the acronym for a bioinformatics tool designed to perform Affymetrix GeneChip Quality Control. This program implements a graphical representation of QC metrics recommended by Affymetrix for GeneChip oligonucleotide array technology. Most importantly, it performs extreme studentized deviate statistical tests for the set of arrays being compared in a given experiment, thus providing an objective measure for outlier detection.
DEVELOPER
Osorio Y Fortéa J, Prina E, Lang T, Milon G, Davory C, Coppée JY, Regnault B.
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows / Linux / MacOsX
- Apache
- R Package
- Perl
:: DOWNLOAD
:: MORE INFORMATION
Citation
J Bioinform Comput Biol. 2008 Apr;6(2):317-34.
AffyGCQC: a web-based interface to detect outlying genechips with extreme studentized deviate tests.
Osorio Y Fortéa J, Prina E, Lang T, Milon G, Davory C, Coppée JY, Regnault B.