ABACAS 1.3.1

:: DESCRIPTION

ABACAS (Algorithm Based Automatic Contiguation of Assembled Sequences) is intended to rapidly contiguate (align, order, orientate), visualize and design primers to close gaps on shotgun assembled contigs based on a reference sequence.

::DEVELOPER

Thomas D. Otto

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• MUMmer
•  Perl

:: DOWNLOAD

  ABACAS

:: MORE INFORMATION

Citation

ABACAS: algorithm-based automatic contiguation of assembled sequences.
Assefa S, Keane TM, Otto TD, Newbold C, Berriman M.
Bioinformatics. 2009 Aug 1;25(15):1968-9.