Vidjil 201806
:: DESCRIPTION
Vidjil processes high-throughput sequencing data to extract V(D)J junctions and gather them into clones. This analysis is based on a seed heuristics and is fast and scalable, as, in the first phase, no alignment is performed with database germline sequences.
Advertisement
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- C++ Compiler
:: DOWNLOAD
:: MORE INFORMATION
Citation
Mathieu Giraud, Mikaël Salson, Marc Duez, Céline Villenet, Sabine Quief, Aurélie Caillault, Nathalie Grardel, Christophe Roumier, Claude Preudhomme, Martin Figeac,
Fast multiclonal clusterization of V(D)J recombinations from high-throughput sequencing,
BMC Genomics, 15:409, doi:10.1186/1471-2164-15-409