DiNAMO 1.0 – Discriminative DNA IUPAC motif discovery tool

DiNAMO 1.0

:: DESCRIPTION

The DiNAMO software implements an exhaustive algorithm to detect over-represented IUPAC motifs in a set of DNA sequences. It has two modes: scanning mode, where all windows are parsed, or fixed-position mode, where only motifs occurring at a specific position in the sequences are taken into account.

Advertisement

::DEVELOPER

Bonsai Bioinformatics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsX

:: DOWNLOAD

DiNAMO

:: MORE INFORMATION

Citation:

Saad C, Noé L, Richard H, Leclerc J, Buisine MP, Touzet H, Figeac M.
DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data.
BMC Bioinformatics. 2018 Jun 11;19(1):223. doi: 10.1186/s12859-018-2215-1. PMID: 29890948; PMCID: PMC5996464.

Leave a Reply

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.