PSODA 0.96 – Phylogenetic Search tool

PSODA 0.96

:: DESCRIPTION

The PSODA project provides an open-source phylogenetic search tool that reads the same data file format as PAUP*

::DEVELOPER

Computational Science Laboratory 

:: SCREENSHOTS

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • Java

:: DOWNLOAD

 PSODA 

:: MORE INFORMATION

Citation:

H. Carroll, M. Ebbert, M. Clement and Q. Snell,
PSODA: Better Tasting and Less Filling Than PAUP,
Proceedings of the 4th Biotechnology and Bioinformatics Symposium, October 2007, pp 74-78.

VAST – Vector Alignment Search Tool

VAST

:: DESCRIPTION

VAST (Vector Alignment Search Tool) is a progam for comparing protein 3D structures.

::DEVELOPER

Gibrat et al.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 VAST

:: MORE INFORMATION

Citation

Gibrat JF, Madej T, Bryant SH:
Surprising similarities in structure comparison.
Curr Opin Struct Biol 1996, 6(3):377-385.