GiniClust 3 1.0.1
:: DESCRIPTION
GiniClust is a clustering method specifically designed for rare cell type detection. It uses the Gini index to identify genes that are associated with rare cell types without prior knowledge.
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
- Linux/Windows/MacOsX
- Python
:: DOWNLOAD
:: MORE INFORMATION
Citation
Rui Dong. Guo-Cheng Yuan.
GiniClust3: a fast and memory-efficient tool for rare cell type identification.
Genome Biol, 17 (1), 144 2016 Jul 1
GiniClust: Detecting Rare Cell Types From Single-Cell Gene Expression Data With Gini Index
Lan Jiang, Huidong Chen, Luca Pinello, Guo-Cheng Yuan
Tsoucas D, Yuan GC.
GiniClust2: a cluster-aware, weighted ensemble clustering method for cell-type detection.
Genome Biology. 2018 May 10;19(1):58.