:: DESCRIPTION
The aim of NTXpred is to predict neurotoxins and it source and probable functions from primary amino acid sequences
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
NO
:: MORE INFORMATION
Citation
Saha, S. and Raghava, G. P. S. (2007)
Prediction of neurotoxins based on their function and source.
In Silico Biology 7, 0025
:: DESCRIPTION
I-TASSER was ranked best in tertiary structure prediction (as ‘Zhang-Server’) in the community-wide blind benchmarks CASP7 and CASP8. It uses mainly profile-profile comparison to identify templates and alignments for deriving distance constraints. Its power lies in how it combines the distance constraints from up to the 50 best-ranked templates. It performs some knowledge-based free modelling in regions without any template-based information.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: MORE INFORMATION
Citation:
Nucleic Acids Res. 2015 Apr 16. pii: gkv342.
I-TASSER server: new development for protein structure and function predictions.
Yang J, Zhang Y
Ambrish Roy, Alper Kucukural, Yang Zhang.
I-TASSER: a unified platform for automated protein structure and function prediction.
Nature Protocols, vol 5, 725-738 (2010)
:: DESCRIPTION
The FunCProp project applies novel label propagation techniques to many different types of gene and protein data in order to predict protein function via Gene Ontology annotations.
::DEVELOPER
the Bonneau Lab
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2013 May 1;29(9):1190-8. doi: 10.1093/bioinformatics/btt110. Epub 2013 Mar 19.
Parametric Bayesian priors and better choice of negative examples improve protein function prediction.
Youngs N, Penfold-Brown D, Drew K, Shasha D, Bonneau R.
:: DESCRIPTION
ncFANs (non-coding RNA Function Annotation Server) re-annotates microarray data and predict ncRNAs functions of interest to the user/functions of Your Favorite ncRNA (YFN). The ncFANs services presently includes to two organisms and three microarray platforms. This is the first web service for the function annotation of long ncRNAs. We believe it will be an important tool for researchers to further analyze the roles of long ncRNAs in various biological processes.
::DEVELOPER
Qi Liao, Hui Xiao,Institute of Computing Technology,China
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
ncFANs: a web server for functional annotation of long non-coding RNAs Nucl.
Acids Res. (2011) 39 (suppl 2): W118-W124.
Qi Liao, Hui Xiao, Dechao Bu, Chaoyong Xie, Ruoyu Miao, Haitao Luo, Guoguang Zhao, Kuntao Yu, Haitao Zhao, Geir Skogerb?, Runsheng Chen, Zhongdao Wu, Changning Liu,; Yi Zha