newicktree 1.1 – LaTeX package for Drawing of Phylogenetic Trees

newicktree 1.1

:: DESCRIPTION

newicktree is a LaTeX package that allows the easy drawing of Newick (New Hampshire) format phylogenetic trees, by providing a high level interface to the PSTricks package.

::DEVELOPER

 DICKS COMPUTATIONAL BIOLOGY GROUP

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 newicktree

:: MORE INFORMATION

Citation:

Savva G, Conn J and Dicks J (2004)
Drawing phylogenetic trees in LaTeX and Microsoft Word
Bioinformatics 20(14): 2322-2323.

mswordtree 1.0 – MS Word Macro for Drawing of Phylogenetic Trees

mswordtree 1.0

:: DESCRIPTION

mswordtree is a tool for generating graphical phylogenetic trees in a Microsoft Word document directly from a Newick format description. The resulting graphic is a Word picture and so can then be moved easily between MS Office applications and extensively edited. mswordtree is a Word Basic macro and can therefore be integrated directly into your installation of Word, eliminating the need for an external program to graphically render your trees.

::DEVELOPER

 DICKS COMPUTATIONAL BIOLOGY GROUP

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows/ Mac OsX
  • MS Word

:: DOWNLOAD

  mswordtree

:: MORE INFORMATION

Citation:

Savva G, Conn J and Dicks J (2004)
Drawing phylogenetic trees in LaTeX and Microsoft Word
Bioinformatics 20(14): 2322-2323.

PlasMapper 2.0 – Web Server for Drawing & Auto-annotating Plasmid Maps

PlasMapper 2.0

:: DESCRIPTION

PlasMapper automatically generates and annotates plasmid maps using only the plasmid DNA sequence as input. Plasmid sequences up to 20,000 bp may be annotated and displayed. Plasmid figures may be rendered in PNG, JPG, SVG or SVGZ format. PlasMapper supports an extensive array of display options.

::DEVELOPER

Wishart Pharmaceutical Research Group

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

PlasMapper

:: MORE INFORMATION

Citation:

Xiaoli Dong, Paul Stothard, Ian J. Forsythe, and David S. Wishart
PlasMapper: a web server for drawing and auto-annotating plasmid maps
Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W660-4.