AptaCluster / AptaGUI
:: DESCRIPTION
AptaCluster allows for an efficient clustering of whole HT-SELEX aptamer pools; a task that could not be accomplished with traditional clustering algorithms due to the enormous size of such datasets
AptaGUI is a graphical user interface for AptaCluster, written in Java. This program allows for visual inspection of HT-SELEX experiments in a concise and efficient manner.
::DEVELOPER
Teresa Przytycka Research Group
:: SCREENSHOTS
:: REQUIREMENTS
- Windows/Linux / MacOsX
- Java
:: DOWNLOAD
:: MORE INFORMATION
Citation:
AptaCluster – A Method to Cluster HT-SELEX Aptamer Pools and Lessons from Its Application.
Hoinka J, Berezhnoy A, Sauna ZE, Gilboa E, Przytycka TM.
Research in Computational Molecular Biology Lecture Notes in Computer Science Volume 8394, 2014, pp 115-128