kmacs
:: DESCRIPTION
kmacs is a new approach to alignment-free sequence comparison. While most alignment-free methods rely on exact word matches, kmacs uses a distance measure based on inexact substing matches.
Advertisement
::DEVELOPER
Department of Bioinformatics , University of Göttingen
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2014 May 13. pii: btu331. [Epub ahead of print]
kmacs: the k-Mismatch Average Common Substring Approach to alignment-free sequence comparison.
Leimeister CA1, Morgenstern B2.