MAnorm
:: DESCRIPTION
MAnorm is a simple and effective method for quantitative comparison of ChIP-Seq data sets describing transcription factor binding sites and epigenetic modifications. The quantitative binding differences inferred by MAnorm showed strong correlation with both the changes in expression of target genes and the binding of cell type-specific regulators.
::DEVELOPER
Plant Bioinformatics and Functional Epigenomics Group, Guo-CHeng Yuan Lab
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/Windows/MacOsX
- R package/Matlab
:: DOWNLOAD
:: MORE INFORMATION
Citation
Shao Z, Zhang Y, Yuan GC., Orkin SH, Waxman DJ.
MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets.
Genome Biology. 2012 Mar 16;13(3):R16.