pibase 1.4.7
:: DESCRIPTION
pibase (get Position Information at BASE position of interest) is a new tool for validating novel Single Nucleotide Variants (SNVs). It utilizes the details in the alignment files in order to identify the reproducible genotypes, hence distinguishing the true variants from artifacts. It can also be used to compare the nucleotide signals in different BAM files.
::DEVELOPER
Institut für Klinische Molekularbiologie
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- Python
:: DOWNLOAD
:: MORE INFORMATION
Citation
From next-generation sequencing alignments to accurate comparison and validation of single-nucleotide variants: the pibase software.
Forster M, et al.
Nucleic Acids Res. 2013 Jan 7;41(1):e16. doi: 10.1093/nar/gks836.