Tag: PROSPECT

ProSpect 0.3.6 – Processing of SELDI Protein Spectra

ProSpect 0.3.6

:: DESCRIPTION

ProSpect is a software of using Ciphergen outcome files to reduce the count of peaks to a biological more interesting subset.

::DEVELOPER

Chuen Seng Tan <chuenseng.tan@gmail.com> ,  Prof. Yudi Pawitan

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux /MacOsX
  • R package

:: DOWNLOAD

 ProSpect

 :: MORE INFORMATION

Citation

Proteomics. 2006 Dec;6(23):6124-33.
Annotated regions of significance of SELDI-TOF-MS spectra for detecting protein biomarkers.
Tan CS1, Ploner A, Quandt A, Lehtiö J, Pernemalm M, Lewensohn R, Pawitan Y.

PROSPECT 2.0 – Threading-based Protein Structure Prediction System

PROSPECT 2.0

:: DESCRIPTION

PROSPECT (PROtein Structure Prediction and Evaluation Computer Toolkit) is a threading-based protein structure prediction system. PROSPECT is designed particularly for the recognization of the fold template whose sequence has insignificant homology to the target sequence.

PROSPECT Online Version

::DEVELOPER

Protein Informatics Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 PROSPECT

:: MORE INFORMATION

Citation

D. Kim, D. Xu, J. Guo, K. Ellrott, Ying Xu,
“PROSPECT II: protein structure prediction program for genome-scale application“,
Protein Engineering, 16 (9), 641 – 650, 2003

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