PowerGxE – Power Calculations for Genetic Association Tests Exploiting Gene-environment Interaction

PowerGxE

:: DESCRIPTION

PowerGxE is a SAS Macro for power calculations for genetic association tests exploiting gene-environment interaction

::DEVELOPER

Peter Kraft

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /  MacOsX/ Windows
  • SAS

:: DOWNLOAD

 PowerGxE

:: MORE INFORMATION

Citation:

Hum Hered. 2007;63(2):111-9. Epub 2007 Feb 2.
Exploiting gene-environment interaction to detect genetic associations.
Kraft P, Yen YC, Stram DO, Morrison J, Gauderman WJ.

GEmis – Power Calculations for Gene-Environment Tests Incorporating Misclassified Exposures

GEmis

:: DESCRIPTION

GEmis (Gene-Environment Dependence and Misclassification) is a software of power calculations for gene-environment tests incorporating misclassified exposures

::DEVELOPER

Peter Kraft

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /  MacOsX/ Windows
  • SAS

:: DOWNLOAD

  GEmis

:: MORE INFORMATION

Citation:

Hum Hered. 2009;68(3):171-81. doi: 10.1159/000224637. Epub 2009 Jun 11.
The impact of gene-environment dependence and misclassification in genetic association studies incorporating gene-environment interactions.
Lindström S, Yen YC, Spiegelman D, Kraft P.

powerGWASinteraction 1.1.3 – Power Calculations for Interactions for GWAS

powerGWASinteraction 1.1.3

:: DESCRIPTION

power GWAS interaction is the code for approximate power calculations for identification of gene x gene and gene x environment interactions in genomewide association studies using a two-stage analysis.

::DEVELOPER

Charles Kooperberg

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

  powerGWASinteraction

:: MORE INFORMATION

Citation

C. Kooperberg and M. LeBlanc (2008).
Increasing the power of identifying gene x gene interactions in genome-wide association studies
Genetic Epidemiology, 32, 255-263.

TDT Power Calculator 1.2.1 – Power Calculation for the TDT

TDT Power Calculator 1.2.1

:: DESCRIPTION

TDT Power Calculator is a software for Power Calculation for the TDT (Transmission disequilibrium test).

::DEVELOPER

Wei-Min Chen

:: SCREENSHOTS

N/A

::REQUIREMENTS

  • Linux  / Windows / MacOsX

:: DOWNLOAD

 TDT Power Calculator

:: MORE INFORMATION

Citation

Chen WM and Deng HW (2001).
A general and accurate approach for computing the statistical power of the transmission disequilibrium test for complex disease genes.
Genet Epidemiol 21:53-67

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