:: DESCRIPTION
PMx is a package of demographic and genetic analysis tools to assist with the management of breeding programs for wildlife species.
PMxLite: PMx Made Simpler
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Lacy, R.C., J.D. Ballou, & J.P. Pollak. 2012.
PMx: Software package for demographic and genetic analysis and management of pedigreed populations.
Methods in Ecology & Evolution 3:433-437.
:: DESCRIPTION
pmx (formerly pymacs) has started as a small bunch of classes to read structure files such as pdb or gro and trajectory data in gromacs xtc format. Over the years it has been extended towards a versatile (bio-) molecular structure manipulation package with some additional functionalities, e.g. gromacs file parsers and scripts for setup and analysis of free energy calculations.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Biophys J. 2010 May 19;98(10):2309-16. doi: 10.1016/j.bpj.2010.01.051.
Protein thermostability calculations using alchemical free energy simulations.
Seeliger D1, de Groot BL.
