JEnsemb 1.78 – Java API to Ensembl data systems

JEnsemb 1.78

:: DESCRIPTION

The JEnsembl API implementation provides basic data retrieval and manipulation functionality from the Core, Compara and Variation databases for all species in Ensembl and EnsemblGenomes and is a platform for the development of a richer API to Ensembl datasources.

::DEVELOPER

Roslin Bioinformatics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/MacOsX / Windows
  • Java

:: DOWNLOAD

 JEnsemb

:: MORE INFORMATION

Citation

JEnsembl: a version-aware Java API to Ensembl data systems.
Paterson T, Law A.
Bioinformatics. 2012 Nov 1;28(21):2724-31. doi: 10.1093/bioinformatics/bts525.

MascotDatfile 3.6.1 – java API for MS/MS search results by Mascot

MascotDatfile 3.6.1

:: DESCRIPTION

 MascotDatfile is an open-source library to fully parse and analyse MASCOT MS/MS search results.

::DEVELOPER

Computational Omics and Systems Biology Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / MacOsX
  • Java

:: DOWNLOAD

 MascotDatfile

:: MORE INFORMATION

Citation

Helsens et al.
MascotDatfile: an open-source library to fully parse and analyse MASCOT MS/MS search results.
Proteomics (2007) vol. 7 (3) pp. 364-6

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