BioQuali 2 – Cytoscape Plugin for Analysing the Global Consistency of Regulatory Networks

BioQuali 2

:: DESCRIPTION

BioQuali analyses regulatory networks and expression datasets by checking a global consistency between the regulatory model and the expression data. It diagnoses a regulatory network searching for the regulations that are not consistent with the expression data, and it outputs a set of genes which predicted expression is decided in order to explain the expression data provided.

BioQuali Online Version

::DEVELOPER

the Symbiose project at IRISA-INRIA, Rennes, France.

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

 BioQuali

:: MORE INFORMATION

Citation:

BioQuali Cytoscape plugin: analysing the global consistency of regulatory networks
Carito Guziolowski , Annabel Bourdé , Francois Moreews and Anne Siege
BMC Genomics 2009, 10:244doi:10.1186/1471-2164-10-244

BiLayout 1.0 – Cytoscape plugin for Analysis & Visualization of Molecular Interaction Networks

BiLayout 1.0

:: DESCRIPTION

BiLayout is a Java plugin for Cytoscape, a software platform for the analysis and visualization of molecular interaction networks. This plugin computes a bipartite network layout for 2 user-selected groups of nodes.

::DEVELOPER

Max-Planck-Institut Informatik

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 BiLayout

:: MORE INFORMATION

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