VARiD 1.0.7f
:: DESCRIPTION
VARiD (Variation Detection) is a Hidden Markov Model for SNP and indel identification with AB-SOLiD color-space as well as regular letter-space reads. VARiD combines both types of data in a single framework which allows for accurate predictions.
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::DEVELOPER
the Computational Biology Lab at the University of Toronto’sDepartment of Computer Science
:: SCREENSHOTS
Command
:: REQUIREMENTS
- Linux
:: DOWNLOAD
:: MORE INFORMATION
Citation:
Adrian V. Dalca; Stephen M. Rumble; Samuel Levy; Michael Brudno.
VARiD: A variation detection framework for color-space and letter-space platforms.
Bioinformatics 2010 26: i343-i349.