TimeTP 1.0

:: DESCRIPTION

TimeTP is a novel time-series analysis method for determining transcription factors (TFs) regulating pathway perturbation, which narrows the focus to perturbed sub-pathways and utilizes the gene regulatory network and protein-protein interaction network to locate TFs triggering the perturbation.

::DEVELOPER

Bio & Health Informatics Lab , Seoul National University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• Python

:: DOWNLOAD

TimeTP

:: MORE INFORMATION

Citation

Jo K, Jung I, Moon JH, Kim S.
Influence maximization in time bounded network identifies transcription factors regulating perturbed pathways.
Bioinformatics. 2016 Jun 15;32(12):i128-i136. doi: 10.1093/bioinformatics/btw275. PMID: 27307609; PMCID: PMC4908359.