Yanagi
:: DESCRIPTION
Yanagi is a tool which segments a transcriptome into disjoint regions to create a segments library from a complete transcriptome annotation that preserves all of its consecutive regions of a given length L while distinguishing annotated alternative splicing events in the transcriptome.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/ Windows/ MacOsX
- R
- Python
:: DOWNLOAD
:: MORE INFORMATION
Citation
Gunady MK, Mount SM, Corrada Bravo H.
Yanagi: Fast and interpretable segment-based alternative splicing and gene expression analysis.
BMC Bioinformatics. 2019 Aug 13;20(1):421. doi: 10.1186/s12859-019-2947-6. PMID: 31409274; PMCID: PMC6693274.