Velvet-SC 0.7.62 – Velvet modified for Single Cell reads

Velvet-SC 0.7.62

:: DESCRIPTION

Velvet-SC is a Velvet modified software for Single Cell reads

::DEVELOPER

UCSD Department of Computer Science and Engineering

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/MacOsX

:: DOWNLOAD

  Velvet-SC

:: MORE INFORMATION

Citation

Hamidreza Chitsaz, Joyclyn L. Yee-Greenbaum, Glenn Tesler, Mary-Jane Lombardo, Christopher L. Dupont, Jonathan H. Badger, Mark Novotny, Douglas B. Rusch, Louise J. Fraser, Niall A. Gormley, Ole Schulz-Trieglaff, Geoffrey P. Smith, Dirk J. Evers, Pavel A. Pevzner, Roger S. Lasken.
Efficient de novo assembly of single-cell bacterial genomes from short-read data sets.
Nature Biotechnology, vol. 29, no. 11, pp. 915-921 (2011), advance online publication, 18 Sep 2011

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