PROBer v0.3.1
:: DESCRIPTION
PROBer is the first unified probabilistic framework for the analysis of a diverse set of sequencing-based ‘toeprinting’ assays. These assays are used to probe RNA secondary structure (DMS/SHAPE-Seq), detect epitranscriptomic mark (Pseudo-Seq), or identify RNA-protein interaction (iCLIP/eCLIP), which are important to understanding post-transcriptional gene regulation from all aspects.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / MacOsX
:: DOWNLOAD
:: MORE INFORMATION
Citation
Cell Syst, 4 (5), 568-574.e7 2017 May 24
PROBer Provides a General Toolkit for Analyzing Sequencing-Based Toeprinting Assays
Bo Li , Akshay Tambe , Sharon Aviran , Lior Pachter