:: DESCRIPTION
TEQC is an R/Bioconductor package for quality assessment of target enrichment experiments.
::DEVELOPER
Bioinformatics Core @ CRG
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2011 May 1;27(9):1316-7. doi: 10.1093/bioinformatics/btr122.
TEQC: an R package for quality control in target capture experiments.
Hummel M, Bonnin S, Lowy E, Roma G.
:: DESCRIPTION
NGSrich is a tool for researchers concerned with target enrichment issues in next-generation sequencing. It evaluates the target enrichment performance of target regions given in BED format and outputs summary statistics, visualizations, and some additional files giving details on the analysis.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
Assessing the enrichment performance in targeted resequencing experiments.
Frommolt P, Abdallah AT, Altmüller J, Motameny S, Thiele H, Becker C, Stemshorn K, Fischer M, Freilinger T, Nürnberg P.
Hum Mutat. 2012 Apr;33(4):635-41. doi: 10.1002/humu.22036
:: DESCRIPTION
miTEA is a tool for identifying and visualizing enriched miRNA targets in ranked lists of genes.
::DEVELOPER
Laboratory of Computational Biology at the Technion.
:: SCREENSHOTS
N/A
:: REQUIREMENTS
:: DOWNLOAD
:: MORE INFORMATION
Citation
miRNA target enrichment analysis reveals directly active miRNAs in health and disease.
Steinfeld I, Navon R, Ach R, Yakhini Z.
Nucleic Acids Res. 2013 Feb 1;41(3):e45.
