SUMO 1.60i – A Statistical Utility for Microarray and Omics data

SUMO 1.60i

:: DESCRIPTION

SUMO (Statistical Utility for Micro array and Omics data) finds genes / conditions which show statistical differences in their expression between different groups of conditions / genes.

::DEVELOPER

Christian Schwager, Ph. D.

:: SCREENSHOTS

:: REQUIREMENTS

Windows

:: DOWNLOAD

SUMO

:: MORE INFORMATION

Citation

Radiat Oncol. 2012 May 17;7:70. doi: 10.1186/1748-717X-7-70.
Identification of stable endogenous control genes for transcriptional profiling of photon, proton and carbon-ion irradiated cells.
Sharungbam GD, Schwager C, Chiblak S, Brons S, Hlatky L, Haberer T, Debus J, Abdollahi A.

SuMo 5.0 – 3D search for Functional Sites

SuMo 5.0

:: DESCRIPTION

SuMo (Surfing the Molecules) is a bioinformatic system for finding similarities in arbitrary 3D structures or substructures of proteins.

::DEVELOPER

SuMo team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Web Browser

:: DOWNLOAD

:: MORE INFORMATION

Citation

Bioinformatics. 2005 Oct 15;21(20):3929-30.
The SuMo server: 3D search for protein functional sites.
Jambon M, Andrieu O, Combet C, Deléage G, Delfaud F, Geourjon C.

SSP 1.0 – SUMO Substrates Prediction

SSP 1.0

:: DESCRIPTION

SSP is a software of SUMO Substrates Prediction. Small Ubiquitin-related MOdifier (SUMO) proteins are ubiquitously expressed in eukaryotic cells (Melchior F. et al., 2003), and implicatedly regulate various cellular processes, e.g. stress responsing (Huang TT et al., 2003), cell-cycle progression (Muller S et al., 2001; Pinsky BA et al., 2002; Seeler JS et al., 2003), and gene expression (Muller S et al., 2004), etc.

::DEVELOPER

The CUCKOO Workgroup

:: SCREENSHOTS

:: REQUIREMENTS

WIndows

:: DOWNLOAD

SSP

:: MORE INFORMATION

Citation

Fengfeng Zhou, Yu Xue, Hualei Lu, Guoliang Chen, Xuebiao Yao.
A genome-wide analysis of sumoylation-related biological processes and functions in human nucleus.
FEBS Lett. 2005 Jun 20;579(16):3369-75.