CRIMSON 2.1.3 beta
:: DESCRIPTION
Crimson facilitates the extraction of sub-trees from very large phylogenetic trees.
::DEVELOPER
:: SCREENSHOTS
:: REQUIREMENTS
- Linux/ MacOsX/ Windows
- java
:: DOWNLOAD
:: MORE INFORMATION
Tag: Subtree
MfstMiner – Enumerating All Maximal Frequent Subtrees
MfstMiner
:: DESCRIPTION
MfstMiner is a tool to enumerate all maximal frequent subtrees in collections of phylogenetic trees.
::DEVELOPER
Computational Biology Laboratory, Department of Computer Science,Iowa State University
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows / Linux / Mac OsX
- C++ Compiler
:: DOWNLOAD
:: MORE INFORMATION
Citation
Algorithms Mol Biol. 2014 Jun 18;9:16. doi: 10.1186/1748-7188-9-16. eCollection 2014.
Enumerating all maximal frequent subtrees in collections of phylogenetic trees.
Deepak A1, Fernández-Baca D
MASTtreedist 1.0 – Visualization of Tree Space based on Maximum Agreement Subtree
MASTtreedist 1.0
:: DESCRIPTION
MASTtreedist is a software for phylogenetic tree-to-tree distance comparison by calculating these trees’ “Maximum Agreemen SubTrees” in order to improve the visualization of tree “landscape”
::DEVELOPER
Hong Huang & Yongji Li
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- MacOsX / Windows / Linux
- Mesquite , Tree Set Viz package.
:: DOWNLOAD
:: MORE INFORMATION
Citation
J Comput Biol. 2013 Jan;20(1):42-9. doi: 10.1089/cmb.2012.0243.
MASTtreedist: visualization of tree space based on maximum agreement subtree.
Huang H, Li Y.
