SplicingTypesAnno 1.0.2

:: DESCRIPTION

SplicingTypesAnno annotates four major splicing types by RNA-Seq data, including intron retention, exon skipping, alternative donor site, and alternative acceptor site. As a post-processing tool for alignment files, it annotates the alternative splicing types with details at the intron or exon level.

:: DEVELOPER

Dr. Xiaoyong Sun, Genomics and Bioinformatics Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux / WIndows

:: DOWNLOAD

 SplicingTypesAnno

:: MORE INFORMATION

Citation

Comput Methods Programs Biomed. 2015 Feb 14. pii: S0169-2607(15)00028-0. doi: 10.1016/j.cmpb.2015.02.004. [Epub ahead of print]
SplicingTypesAnno: Annotating and quantifying alternative splicing events for RNA-Seq data.
Sun X, Zuo F, Ru Y, Guo J, Yan X, Sablok G