OBITools 1.2.13 – Scripts and Library for Sequence Analysis

OBITools 1.2.13

:: DESCRIPTION

OBITools is a set of python programs developed to simplify the manipulation of sequence files. They were mainly designed to help us for analyzing Next Generation Sequencer outputs (454 or Illumina) in the context of DNA Metabarcoding.

::DEVELOPER

OBITools team

:: SCREENSHOTS

N/A

::REQUIREMENTS

  • Linux/windows/MacOsX
  • Python

:: DOWNLOAD

 OBITools

:: MORE INFORMATION

Citation

OBITools: a Unix-inspired software package for DNA metabarcoding.
Boyer F, Mercier C, Bonin A, Le Bras Y, Taberlet P, Coissac E.
Mol Ecol Resour. 2015 May 9. doi: 10.1111/1755-0998.12428.

Bioinformatics Analysis Scripts

Bioinformatics Analysis Scripts

:: DESCRIPTION

Scripts and workflows written by NEBC members for analysis and standard tasks in bioinformatics.

  • Sequence Processing
  • Sequence Formatting and Other Text Manipulation
  • Biological Database Searching and Results Processing
  • Microarray related scripts
  • Postgresql and MySql Database Scripts
  • Other scripts

::DEVELOPER

NERC Environmental Bioinformatics Centre.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Window / MacOsX
  • Perl/Python

:: DOWNLOAD

 Scripts

:: MORE INFORMATION

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