SCOPE++ 20130523
:: DESCRIPTION
SCOPE++(Sequence Classification Of homoPolymer Emissions) is a C++-based program for accurately identifying homopolymer in cDNA sequences using Hidden Markov Models. This can be extended to trimming poly(A)/poly(T) tails, or identifying A,C,G,T,or N homopolymer sequences.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- C Compiler
:: DOWNLOAD
:: MORE INFORMATION
Citation
Genomics. 2014 Sep;104(3):157-62. doi: 10.1016/j.ygeno.2014.07.005
SCOPE++: sequence classification of homoPolymer emissions.
Morton JT, Abrudan P, Figueroa N, Liang C, Karro JE