Tag: PrISE

PRISE – Designing Sequence-selective PCR Primers

PRISE

:: DESCRIPTION

PRISE (PRImer Selector) is an interactive software package for PCR primer design. PRISE enables the design of sequence-specific / sequence-selective PCR primers. One important feature of PRISE is that it automates the task of placing primer-template mismatches at the 3′ end of the primers – a property that is crucial for sequence selectivity / specificity

::DEVELOPER

Rachid Ounit, Algorithms and Computational Biology Lab ,University of California

:: SCREENSHOTS

PRISE

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

  PRISE

:: MORE INFORMATION

Citation

J Microbiol Methods. 2008 Mar;72(3):263-7. doi: 10.1016/j.mimet.2007.12.004.
PRISE (PRImer SElector): software for designing sequence-selective PCR primers.
Fu Q1, Ruegger P, Bent E, Chrobak M, Borneman J.

PrISE 20110723 – Prediction of protein-protein Interface residues using Structural Elements

PrISE 20110723

:: DESCRIPTION

PrISE predict interface residues using local surface structural similarity. PrISe represents a local surface structure using structural elements.

::DEVELOPER

Artificial Intelligence Research Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation:

BMC Bioinformatics. 2012 Mar 18;13:41. doi: 10.1186/1471-2105-13-41.
Predicting protein-protein interface residues using local surface structural similarity.
Jordan RA1, El-Manzalawy Y, Dobbs D, Honavar V.

Exit mobile version