BPBAac – T3S effector prediction tool based on position-specific Amino Acid composition features in N-termini

BPBAac

:: DESCRIPTION

BPBAac, a classifier, was developed and trained using Support Vector Machine (SVM) based on the Aac feature extracted using a Bi-profile Bayes model.

::DEVELOPER

BioComputer, The Chinese University of Hong Kong

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows / MacOsX
  • R package

:: DOWNLOAD

 BPBAac

:: MORE INFORMATION

Citation:

Bioinformatics. 2011 Mar 15;27(6):777-84. doi: 10.1093/bioinformatics/btr021. Epub 2011 Jan 13.
High-accuracy prediction of bacterial type III secreted effectors based on position-specific amino acid composition profiles.
Wang Y, Zhang Q, Sun MA, Guo D.

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