PET 0.7.9 – Parameter Estimation Toolkit

PET 0.7.9

:: DESCRIPTION

PET (Parameter Estimation Toolkit)is a graphical user interface (GUI) for discovering rate constants, of molecular network models, that fit experimental data. It is designed for use by theoretical biologists to build regulatory network models and compare the models to experimental results.

::DEVELOPER

Jason Zwolak

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

 PET

:: MORE INFORMATION

Citation:

Methods Mol Biol. 2009;500:81-111.
Modeling molecular regulatory networks with JigCell and PET.
Shaffer CA, Zwolak JW, Randhawa R, Tyson JJ.

PET-Tool 3.0 – Processing the Sequences generated from PET technology

PET-Tool 3.0

:: DESCRIPTION

PET-Tool is a mySQL-based muti-component software package specifically designed for processing the sequences generated from PET (Paired-End diTag) technology.

:: DEVELOPER

the Cloning and Sequencing Group at the Genome Institute of Singapore

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Apach
  • MySQL
  • C Compiler

:: DOWNLOAD

 PET-Tool

:: MORE INFORMATION

Citation

Kuo Ping Chiu, Chee-Hong Wong, Qiongyu Chen, Pramila Ariyaratne, Hong Sain Ooi, Chia-Lin Wei, Wing-Kin Ken Sung, Yijun Ruan (2006)
PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data
BMC Bioinformatics 7, 390

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