REPET 3.0 / PASTEClassifier 2.0
:: DESCRIPTION
REPET is a software of detection, annotation and analysis of repeats in genomic sequences, specifically designed for transposable elements
PASTEClassifier classifies TEs by searching for structural features and similarities.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
:: DOWNLOAD
:: MORE INFORMATION
Citation
PASTEC: An Automatic Transposable Element Classification Tool.
Hoede C, Arnoux S, Moisset M, Chaumier T, Inizan O, Jamilloux V, Quesneville H.
PLoS One. 2014 May 2;9(5):e91929. doi: 10.1371/journal.pone.0091929.
Flutre T, Duprat E, Feuillet C, Quesneville H.
Considering transposable element diversification in de novo annotation approaches.
PLoS One. 2011 Jan 31;6(1):e16526.