Monophyler 1.0

:: DESCRIPTION

Monophyler computes the probability of monophyly of a specified set of gene lineages conditional on a species tree. Monophyler uses the coalescent together with an arbitrary species tree to determine the monophyly probability for a set of lineages or the reciprocal monophyly probability for a pair of sets of lineages. It can also accommodate various computations involving three or four lineage sets.

::DEVELOPER

Rosenberg lab at Stanford University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux

:: DOWNLOAD

Monophyler

:: MORE INFORMATION

Citation

Mehta RS, Bryant D, Rosenberg NA.
The probability of monophyly of a sample of gene lineages on a species tree.
Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):8002-9. doi: 10.1073/pnas.1601074113. Epub 2016 Jul 18. PMID: 27432988; PMCID: PMC4961160.