Meerkat 0.189
:: DESCRIPTION
Meerkat is designed to identify structure variations (SVs) from paired end high throughput sequencing data. It predicts SVs from discordant read pairs (pairs that mapped to reference genome in unexpected way).
::DEVELOPER
Peter Park’s lab at CBMI, Harvard Medical School
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
:: DOWNLOAD
:: MORE INFORMATION
Citation
Cell. 2013 May 9;153(4):919-29. doi: 10.1016/j.cell.2013.04.010.
Diverse mechanisms of somatic structural variations in human cancer genomes.
Yang L, Luquette LJ, Gehlenborg N, Xi R, Haseley PS, Hsieh CH, Zhang C, Ren X, Protopopov A, Chin L, Kucherlapati R, Lee C, Park PJ.