LocalFold 1.0

:: DESCRIPTION

LocalFold is a modification of the RNAplfold local folding algorithm. LocalFold only considers base-pairs centred within a window such that (i,j) are not located within the first and last positions of the windows.

::DEVELOPER

Chair for Bioinformatics Freiburg

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux
• Vienna RNA package

:: DOWNLOAD

 LocalFold

:: MORE INFORMATION

Citation

Sita J. Lange, Daniel Maticzka, Mathias Möhl, Joshua N. Gagnon, Chris M. Brown and Rolf Backofen
Global or local? Predicting secondary structure and accessibility in mRNAs