SBML2TikZ – Converts SBML files to graphical form in LaTeX and PDF using PGF/TikZ

SBML2TikZ

:: DESCRIPTION

SBML2TikZ provides automatic generation of PGF/TikZ TeX Macros to illustrate SBML graphs. The rendering is dependent on the SBML Render Extension proposed by Gauges et al. and the rendering library is built on the existing SBML Layout Library.

::DEVELOPER

SBML2TikZ team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Windows / Linux/ MacOsX

:: DOWNLOAD

SBML2TikZ

:: MORE INFORMATION

Citation

Bioinformatics. 2010 Nov 1;26(21):2794-5. doi: 10.1093/bioinformatics/btq512. Epub 2010 Sep 9.
SBML2TikZ: supporting the SBML render extension in LaTeX.
Shen SY1, Bergmann F, Sauro HM.

newicktree 1.1 – LaTeX package for Drawing of Phylogenetic Trees

newicktree 1.1

:: DESCRIPTION

newicktree is a LaTeX package that allows the easy drawing of Newick (New Hampshire) format phylogenetic trees, by providing a high level interface to the PSTricks package.

::DEVELOPER

DICKS COMPUTATIONAL BIOLOGY GROUP

:: SCREENSHOTS

N/A

:: REQUIREMENTS

Windows/ Mac OsX
LaTeX

:: DOWNLOAD

newicktree

:: MORE INFORMATION

Citation:

Savva G, Conn J and Dicks J (2004)
Drawing phylogenetic trees in LaTeX and Microsoft Word
Bioinformatics 20(14): 2322-2323.

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