Sweep 1.1 – Large-scale Analysis of Haplotype Structure Sweep 1.1 :: DESCRIPTION Sweep allows large-scale analysis of haplotype structure in genomes for the primary purpose of detecting evidence of natural selection. ::DEVELOPER Sweep Team :: SCREENSHOTS :: REQUIREMENTS Linux / Mac OsX /Windows :: DOWNLOAD Sweep :: MORE INFORMATION
LARVA – Large-scale Analysis of Variants in noncoding Annotations LARVA :: DESCRIPTION LARVA is a computational framework designed to facilitate the study of noncoding variants. It addresses issues that have made it difficult to derive an accurate model of the background mutation rates of noncoding elements in cancer genomes. ::DEVELOPER Gerstein Lab :: SCREENSHOTS N/A :: REQUIREMENTS Linux :: DOWNLOAD LARVA :: MORE INFORMATION Citation: LARVA: an integrative framework for large-scale analysis of recurrent variants in noncoding annotations. Lochovsky L, Zhang J, Fu Y, Khurana E, Gerstein M. Nucleic Acids Res. 2015 Sep 30;43(17):8123-34. doi: 10.1093/nar/gkv803.