Comb-p 0.50.2
:: DESCRIPTION
comb-p is a command-line tool and a python library that manipulates BED files of possibly irregularly spaced P-values and (1) calculates auto-correlation, (2) combines adjacent P-values, (3) performs false discovery adjustment, (4) finds regions of enrichment (i.e. series of adjacent low P-values) and (5) assigns significance to those regions.
::DEVELOPER
Katerina Kechris , Brent Pedersen
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows/Linux
- Python
:: DOWNLOAD
:: MORE INFORMATION
Citation
Bioinformatics. 2012 Nov 15;28(22):2986-8. doi: 10.1093/bioinformatics/bts545. Epub 2012 Sep 5.
Comb-p: software for combining, analyzing, grouping and correcting spatially correlated P-values.
Pedersen BS1, Schwartz DA, Yang IV, Kechris KJ.