ASCIIGenome v1.16.0 – Text Only Genome Viewer

ASCIIGenome v1.16.0

:: DESCRIPTION

ASCIIGenome is a command-line genome browser running from terminal window and solely based on ASCII characters.

::DEVELOPER

Dario Beraldi

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

ASCIIGenome

:: MORE INFORMATION

Citation

Beraldi D.
ASCIIGenome: a command line genome browser for console terminals.
Bioinformatics. 2017 May 15;33(10):1568-1569. doi: 10.1093/bioinformatics/btx007. PMID: 28119307; PMCID: PMC5423454.

GenomeD3Plot – SVG based Genome Viewer written in Javascript using D3

GenomeD3Plot

:: DESCRIPTION

GenomeD3Plot (formerly Islandplot) is an SVG based genome viewer written in javascript using D3

::DEVELOPER

Brinkman lab 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • javascript

:: DOWNLOAD

GenomeD3Plot

:: MORE INFORMATION

Citation:

GenomeD3Plot: A library for rich, interactive visualizations of genomic data in web applications.
Laird MR, Langille MG, Brinkman FS.
Bioinformatics. 2015 Jun 20. pii: btv376.

GenomeJack 3.1 – Genome Viewer for Next-Generation Sequencing

GenomeJack 3.1

:: DESCRIPTION

GenomeJack is a genome browser specialized in next-generation sequencing data.

::DEVELOPER

MITSUBISHI SPACE SOFTWARE CO.,LTD

:: SCREENSHOTS

GenomeJack

:: REQUIREMENTS

  • Linux / Windows / MacOsX
  • Java

:: DOWNLOAD

  GenomeJack

:: MORE INFORMATION

Citation

Mult Scler. 2013 Jul;19(8):1035-45. doi: 10.1177/1352458512471873.
Molecular network of chromatin immunoprecipitation followed by deep sequencing-based vitamin D receptor target genes.
Satoh J, Tabunoki H.

GBrowse 2.54 – Genome Viewer

GBrowse 2.54

:: DESCRIPTION

GBrowse (Generic Genome Browser ) is a combination of database and interactive web pages for manipulating and displaying annotations on genomes.The tool is flexible to allow you to upload and incorporate your own unpublished data into the genomic viewer. You’ll have fun as you explore a variety of genomes (from paramecia to personal genomics) with the new perspective and detailed annotations that GBrowse provides.

::DEVELOPER

the Generic Model Organism Database

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

GBrowse

:: MORE INFORMATION

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