bz-rates – Calculate Mutation Rates from Fluctuation Assays

bz-rates

:: DESCRIPTION

bz-rates is a web-tool that allows to compute mutation rates from fluctuation assays.

::DEVELOPER

Laboratory of Computational and Quantitative Biology (LCQB)

:: SCREENSHOTS

N/a

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

bz-rates: A Web Tool to Estimate Mutation Rates from Fluctuation Analysis.
Gillet-Markowska A, Louvel G, Fischer G.
G3 (Bethesda). 2015 Sep 2. pii: g3.115.019836. doi: 10.1534/g3.115.019836.

FlexPred – Protein Fluctuation Prediction using SVR

FlexPred

:: DESCRIPTION

FlexPred predicts real-value fluctuation of each residues in a query protein structure. Predication can be performed for single-chain, complex proteins, and computational models.

::DEVELOPER

Kihara Bioinformatics Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Methods Mol Biol. 2017;1484:175-186. doi: 10.1007/978-1-4939-6406-2_13.
Predicting Real-Valued Protein Residue Fluctuation Using FlexPred.
Peterson L, Jamroz M, Kolinski A, Kihara D

CABS-flex – Server for fast Simulation of Protein Structure Fluctuations

CABS-flex

:: DESCRIPTION

CABS-flex is an efficient procedure for the simulation of structure flexibility of folded globular proteins.

::DEVELOPER

Laboratory of Theory of Biopolymers,  University of Warsaw

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Bioinformatics. 2014 May 2.
CABS-flex predictions of protein flexibility compared with NMR ensembles.
Jamroz M1, Kolinski A, Kmiecik S.

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