scvis 0.1.0 – Dimension Reduction of high-dimensional Biological data.

scvis 0.1.0

:: DESCRIPTION

scvis is a python package for dimension reduction of high-dimensional biological data, especially single-cell RNA-sequencing (scRNA-seq) data.

::DEVELOPER

Shah Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX / Windows
  • Python

:: DOWNLOAD

scvis

:: MORE INFORMATION

Citation

Nat Commun. 2018 May 21;9(1):2002. doi: 10.1038/s41467-018-04368-5.
Interpretable dimensionality reduction of single cell transcriptome data with deep generative models.
Ding J, Condon A, Shah SP

MetaPCA 0.1.4 – Meta-analysis in the Dimension Reduction of Genomic data

MetaPCA 0.1.4

:: DESCRIPTION

 MetaPCA is a software of dimension reductioin by PCA, sparse PCA and robust PCA in meta-analysis. The software implements simultaneous dimension reduction using PCA when multiple studies are combined.

::DEVELOPER

George C. Tseng 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

  MetaPCA

:: MORE INFORMATION

 

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